BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B04SP1|AL428846
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1738 0.0
>3x_Contig1783
Length = 22123
Score = 1738 bits (876), Expect = 0.0
Identities = 876/876 (100%)
Strand = Plus / Minus
Query: 1 aatactttaataaagatcttattgttgacggtgcgttgtacatcggatccaagatacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5317 aatactttaataaagatcttattgttgacggtgcgttgtacatcggatccaagatacaaa 5258
Query: 61 cgcttggtttggacgtgaaggttttgggatctacacaaaagattcaaaacacaggtacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5257 cgcttggtttggacgtgaaggttttgggatctacacaaaagattcaaaacacaggtacca 5198
Query: 121 ttgtattgaatggccataacactacgctaccctcaacttactattgggtcggtgaatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5197 ttgtattgaatggccataacactacgctaccctcaacttactattgggtcggtgaatcct 5138
Query: 181 tcaaaaatgatggtgaaatttactggattgctcaatcatcattaattggttcactttatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5137 tcaaaaatgatggtgaaatttactggattgctcaatcatcattaattggttcactttatg 5078
Query: 241 aaatcattcctagcagttccttcgaaaacaatggtttgttgtctttcacgcatgaaaacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077 aaatcattcctagcagttccttcgaaaacaatggtttgttgtctttcacgcatgaaaacg 5018
Query: 301 gaagaaaaggtggtaccttaactttgggtaaccttggatctgctatcacaaattctggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5017 gaagaaaaggtggtaccttaactttgggtaaccttggatctgctatcacaaattctggta 4958
Query: 361 cgatttgcttgaaaggtgttgtctacaaacaatcgggaatggtttccggtgaaagtggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4957 cgatttgcttgaaaggtgttgtctacaaacaatcgggaatggtttccggtgaaagtggtt 4898
Query: 421 gtataagtatcggtgatgaaggtttgttctgggcttacaatggttaccaactaactgatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4897 gtataagtatcggtgatgaaggtttgttctgggcttacaatggttaccaactaactgatc 4838
Query: 481 aaacaatttacttgagttccgacagtgctgctctacgtctggaagcactaggttcgccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4837 aaacaatttacttgagttccgacagtgctgctctacgtctggaagcactaggttcgccaa 4778
Query: 541 catttgtttacaaagttgttggttttggtaaacaaaaggttggtttagctgttgcaatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4777 catttgtttacaaagttgttggttttggtaaacaaaaggttggtttagctgttgcaatta 4718
Query: 601 gagaattccaatatgatgaagacactggtatcctcacagtttcaagtctgcttatcactt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4717 gagaattccaatatgatgaagacactggtatcctcacagtttcaagtctgcttatcactt 4658
Query: 661 ataagttggatataggaaaaggatacgaccgcactaaattctatgttgatgacatcgatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4657 ataagttggatataggaaaaggatacgaccgcactaaattctatgttgatgacatcgatt 4598
Query: 721 tcggagcaggttatattacggttctgaatgggggtatttattacagtggagacgttccta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4597 tcggagcaggttatattacggttctgaatgggggtatttattacagtggagacgttccta 4538
Query: 781 cctttgagattcctgaagcttgtcaaccttgtccagaaacagctccttggtacactgatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4537 cctttgagattcctgaagcttgtcaaccttgtccagaaacagctccttggtacactgatt 4478
Query: 841 cgaacccatctgatgtttctacgataagtgatgaca 876
||||||||||||||||||||||||||||||||||||
Sbjct: 4477 cgaacccatctgatgtttctacgataagtgatgaca 4442
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6324
Number of Sequences: 1807
Number of extensions: 6324
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)